Climate and Ecological Niche Factor Analysis

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Documentation for package ‘CENFA’ version 1.1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

CENFA-package	Tools for climate- and ecological-niche factor analysis
ABPR	Tree distribution data
brStick	Broken-stick method for detection of significant factors
climdat.fut	Future climate data
climdat.hist	Historical climate data
cnfa	Climate-niche factor analysis
cnfa-class	cnfa-class
cnfa-method	Climate-niche factor analysis
cov	Accessing CENFA slots
cov.cnfa	Accessing CENFA slots
cov.enfa	Accessing CENFA slots
cov.GLcenfa	Accessing CENFA slots
departure	Climatic departure
departure-class	departure-class
departure-method	Climatic departure
enfa	Ecological-niche factor analysis
enfa-class	enfa-class
enfa-method	Ecological-niche factor analysis
exposure_map	Create an exposure map
GLcenfa	Climate-niche factor analysis for reference study area
GLcenfa-class	GLcenfa-class
GLcenfa-method	Climate-niche factor analysis for reference study area
GLdeparture	Climatic departure of reference study area
GLdeparture-class	GLdeparture-class
GLdeparture-method	Climatic departure of reference study area
m.factor	Accessing CENFA slots
marginality	Accessing CENFA slots
names-method	Accessing CENFA slots
parCov	Efficient calculation of covariance matrices for Raster* objects
parCov-method	Efficient calculation of covariance matrices for Raster* objects
parScale	Efficient scaling of Raster* objects
parScale-method	Efficient scaling of Raster* objects
predict	Predict methods
predict-method	Predict methods
print.cnfa	Climate-niche factor analysis
print.enfa	Ecological-niche factor analysis
print.GLcenfa	Climate-niche factor analysis for reference study area
print.GLdeparture	Climatic departure of reference study area
QUGA	Tree distribution data
raster	Accessing CENFA slots
raster-method	Accessing CENFA slots
s.factor	Accessing CENFA slots
scatter	Biplots of 'cnfa' and 'enfa' objects.
scatter-method	Biplots of 'cnfa' and 'enfa' objects.
sensitivity	Accessing CENFA slots
sensitivity_map	Create a sensitivity map
SESE	Tree distribution data
show.cnfa	Climate-niche factor analysis
show.enfa	Ecological-niche factor analysis
show.GLcenfa	Climate-niche factor analysis for reference study area
show.GLdeparture	Climatic departure of reference study area
slot-access	Accessing CENFA slots
specialization	Accessing CENFA slots
stretchPlot	Contrast adjustments for RasterLayer plots
stretchPlot-method	Contrast adjustments for RasterLayer plots
tree-data	Tree distribution data
vulnerability	Climatic vulnerability
vulnerability-class	vulnerability-class
vulnerability-method	Climatic vulnerability
vulnerability_map	Create a vulnerability map