# Fatty Acid Metabolic Analysis

## Documentation for package ‘FAMetA’ version 0.1.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

addFA | Add missing FA annotations
annotateFA | FA annotation
blankSubstraction | substract blank samples.
changeFArt | Modify rt peak limits of annotated FAs
correctNatAb13C | correct data for natural abundance of 13C using accucor algorithm.
curateFAannotations | Modify FA annotations
dataCorrection | Data correction for natural abundance of 13C and data normalization using internal standards followed by blank substraction.
desaturationAnalysis | Desaturation analysis of fatty acids.
desaturationsdb | Desaturation reactions database.
elongationAnalysis | Elongation analysis of fatty acids longer than 16 carbons.
examplefadata | Example fadata list.
externalNormalization | External normalization using additional measures (i.e. protein levels).
fattyacidsdb | Fatty Acids database.
normalizeIS | Data normalization using internal stardards.
parameters | Parameters for FA metabolic analysis.
plotFA | Plot FA EICs
readfadatafile | read FA data from a csv file.
removeFA | Remove incorrect FA annotations
searchFAisotopes | Search FA isotopes
searchIS | Search internal stardards.
ssexamplefadata | Toy example fadata list.
summarizeResults | Obtain result tables and heatmaps that help interpreting your results.
synthesisAnalysis | De novo synthesis analysis of fatty acids until 16 carbons.