Individual Based Model Population Simulation

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Documentation for package ‘IBMPopSim’ version 0.4.3

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age_pyramid Age pyramid from a population data frame at a given time.
age_pyramids Age pyramid from a population data frame at some given times.
check_intensity_code Check the intensity code.
check_interaction_code Check the interaction code.
check_kernel_code Check the kernel code.
death_table Death table
EWdata_hmd England and Wale mortality data (source: Human Mortality Database)
EW_popIMD_14 England and Wales (EW) 2014 population and death rates by Index of Multiple Deprivation (IMD).
EW_pop_14 England and Wales (EW) 2014 population, death and birth rates.
EW_pop_out Example of "human population" after 100 years of simulation.
exposure_table Exposure table
get_characteristics Returns names and C types of the characteristics.
gompertz Gompertz–Makeham intensity function.
linfun Linear interpolation function.
max.stepfun Returns the maximum of a function of class 'stepfun'.
merge_pop_withid A function returning a merged dataframe from a list of population dataframes with id.
mk_event_individual Creates an event with intensity of class individual.
mk_event_inhomogeneous_poisson Creates inhomogeneous Poisson class event.
mk_event_interaction Creates an event with intensity of type interaction.
mk_event_poisson Creates Poisson class event.
mk_model Creates a model for IBMPopSim.
piecewise_x Piecewise real function.
piecewise_xy Piecewise real function of two variables.
plot_population Plot the age pyramid of a population data frame (at a given time).
plot_pyramid Plot an age pyramid from age pyramid data frame.
popsample Sample a population from an age pyramid (at a given time).
popsim Simulation of a model.
population_alive Returns a population of individuals alive.
stepfun Step Function.
summary.event Summary of an event.
summary.model Summary of a model.
toy_params Toy parameters for IBMPopSim-human_popIMD vignette example.
weibull Weibull function.