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| geom_logo | Plots sequence logo as a layer on ggplot |
| ggseqlogo | Quick sequence logo plot |
| list_col_schemes | List color schemes available in ggseqlogo |
| list_fonts | List fonts available in ggseqlogo |
| make_col_scheme | Create new sequence logo color scheme |
| pfms_dna | List of position frequency matrices for transcription factors |
| seqs_aa | List of aligned kinase-substrate binding sequences |
| seqs_dna | List of aligned transcription factor binding sequences |
| theme_logo | ggseqlogo custom theme |