Compute, Handle and Plot Incidence of Dated Events


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Documentation for package ‘incidence2’ version 1.2.3

Help Pages

accessors Access various elements of an incidence object
as.data.frame.incidence_df Convert incident object to dataframe
as_tibble Convert incident object to a tibble
as_tibble.incidence_df Convert incident object to a tibble
build_incidence Coerce to incidence
complete_counts Complete counts for all date and group combinations
covidregionaldataUK Regional data for COVID-19 cases in the UK
cumulate Compute cumulative 'incidence'
cumulate.default Compute cumulative 'incidence'
cumulate.incidence_df Compute cumulative 'incidence'
facet_plot Plotting functions
facet_plot.incidence2 Plotting functions
format.incidence_df Print an incidence object.
get_counts Access various elements of an incidence object
get_counts.default Access various elements of an incidence object
get_counts.incidence_df Access various elements of an incidence object
get_count_names Access various elements of an incidence object
get_count_names.default Access various elements of an incidence object
get_count_names.incidence_df Access various elements of an incidence object
get_dates Access various elements of an incidence object
get_dates_name Access various elements of an incidence object
get_dates_name.default Access various elements of an incidence object
get_dates_name.incidence_df Access various elements of an incidence object
get_date_index Access various elements of an incidence object
get_date_index.default Access various elements of an incidence object
get_date_index.incidence_df Access various elements of an incidence object
get_group_names Access various elements of an incidence object
get_group_names.default Access various elements of an incidence object
get_group_names.incidence_df Access various elements of an incidence object
get_interval Access various elements of an incidence object
get_interval.default Access various elements of an incidence object
get_interval.incidence2 Access various elements of an incidence object
get_n Access various elements of an incidence object
get_n.default Access various elements of an incidence object
get_n.incidence_df Access various elements of an incidence object
get_timespan Access various elements of an incidence object
get_timespan.default Access various elements of an incidence object
get_timespan.incidence2 Access various elements of an incidence object
incidence Compute the incidence of events
keep Keep first and last occurences
keep_first Keep first and last occurences
keep_first.default Keep first and last occurences
keep_first.grates_month Keep first and last occurences
keep_first.grates_period Keep first and last occurences
keep_first.grates_quarter Keep first and last occurences
keep_first.grates_year Keep first and last occurences
keep_first.grates_yearweek Keep first and last occurences
keep_first.incidence_df Keep first and last occurences
keep_last Keep first and last occurences
keep_last.default Keep first and last occurences
keep_last.grates_month Keep first and last occurences
keep_last.grates_period Keep first and last occurences
keep_last.grates_quarter Keep first and last occurences
keep_last.grates_year Keep first and last occurences
keep_last.grates_yearweek Keep first and last occurences
keep_last.incidence_df Keep first and last occurences
muted Color palettes used in incidence
new_incidence Incidence constructor and validator
palettes Color palettes used in incidence
plot.incidence2 Plotting functions
print.incidence_df Print an incidence object.
print_incidence Print an incidence object.
regroup Regroup 'incidence' objects
summary.incidence_df Summary of an incidence object
validate_incidence Incidence constructor and validator
vibrant Color palettes used in incidence