Package: GGMncv
Type: Package
Title: Gaussian Graphical Models with Nonconvex Regularization
Version: 2.1.1
Date: 2021-12-13
Authors@R: person("Donald", "Williams", email = "drwwilliams@ucdavis.edu", role = c("aut", "cre"))
Description: Estimate Gaussian graphical models with nonconvex penalties <doi:10.31234/osf.io/ad57p>, 
  including the atan Wang and Zhu (2016) <doi:10.1155/2016/6495417>, 
  seamless L0 Dicker, Huang, and Lin (2013) <doi:10.5705/ss.2011.074>,
  exponential Wang, Fan, and Zhu <doi:10.1007/s10463-016-0588-3>, 
  smooth integration of counting and absolute deviation Lv and Fan (2009) <doi:10.1214/09-AOS683>,
  logarithm Mazumder, Friedman, and Hastie (2011) <doi:10.1198/jasa.2011.tm09738>,
  Lq, smoothly clipped absolute deviation Fan and Li (2001) <doi:10.1198/016214501753382273>,
  and minimax concave penalty Zhang (2010) <doi:10.1214/09-AOS729>. There are also extensions
  for computing variable inclusion probabilities, multiple regression coefficients, and 
  statistical inference <doi:10.1214/15-EJS1031>.
License: GPL-2
Depends: R (>= 4.0.0)
Imports: Rcpp (>= 1.0.4.6), Rdpack (>= 0.11-1), reshape, GGally (>=
        1.4.0), ggplot2 (>= 3.3.0), glassoFast (>= 1.0), network (>=
        1.15), numDeriv (>= 2016.8-1.1), mathjaxr (>= 1.0-1), MASS (>=
        7.3-51.5), methods, parallel, pbapply, sna (>= 2.5), stats,
        utils
Suggests: car, corpcor, corrplot, dplyr, NetworkToolbox,
        NetworkComparisonTest, nlshrink, rmarkdown, knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
LinkingTo: Rcpp, RcppArmadillo
RdMacros: Rdpack, mathjaxr
BugReports: https://github.com/donaldRwilliams/GGMncv/issues
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2021-12-14 12:42:28 UTC; bryce
Author: Donald Williams [aut, cre]
Maintainer: Donald Williams <drwwilliams@ucdavis.edu>
Repository: CRAN
Date/Publication: 2021-12-15 07:40:28 UTC
Built: R 4.2.0; aarch64-apple-darwin20; 2022-04-01 03:00:59 UTC; unix
Archs: GGMncv.so.dSYM
