Streamline Physical Activity Research

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Documentation for package ‘PAutilities’ version 1.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

as	As("summaryTransition", "data.frame")
ba_analysis	Perform Bland-Altman analysis on a data frame
ba_plot	Create a Bland-Altman plot
bout_mvpa	Classify moderate-to-vigorous physical activity in bouts of a specific minimum length
cvd_risk	Calculate risk of cardiovascular disease
cvd_risk.data.frame	Calculate risk of cardiovascular disease
cvd_risk.default	Calculate risk of cardiovascular disease
descriptives	Compute descriptive statistics for a variable in the metabolic data set
df_continuous	Check if a dataframe is continuous
df_reorder	Reorder the columns of a data frame
epoch_length_sec	Determine epoch length in seconds
ex_data	Example data for calculating bouts of moderate-to-vigorous physical activity
full_days	Drop incomplete days from a dataset
get_age	Calculate age
get_bmr	Retrieve estimated basal metabolic rate for an individual
get_duration	Printing and timing utility for managing processes
get_indices	Retrieve indices for a rolling window analysis
get_intensity	Classify activity intensity
get_kcal_vo2_conversion	Retrieve conversion factors from kilocalories to oxygen consumption
get_ree	Calculate resting energy expenditure
index_runs	Run length encoding with indices
manage_procedure	Printing and timing utility for managing processes
mean_sd	Compute the mean and standard deviation of a vector, returning a formatted string containing the values as 'M +/- SD'
mean_sd.data.frame	Compute the mean and standard deviation of a vector, returning a formatted string containing the values as 'M +/- SD'
mean_sd.default	Compute the mean and standard deviation of a vector, returning a formatted string containing the values as 'M +/- SD'
paired_equivalence_test	Perform equivalence testing on paired samples
paired_equivalence_test.data.frame	Perform equivalence testing on paired samples
paired_equivalence_test.default	Perform equivalence testing on paired samples
PAutilities	PAutilities: Streamline Physical Activity Research
plot.paired_equivalence	Plot the outcome of a paired equivalence test
plot.spurious_curve	Plot a spurious curve
plot.transition	Plot the transitions and matchings from a 'transition' object
residual_adjust	Perform residual adjustment on an epidemiologic variable
rmr_sliding	Calculate resting metabolic rate using a sliding window method
rolling_groups	Loop along a vector, returning n elements at a time in a list
shaded_equivalence_plot	Plot the outcome of a paired equivalence test
spurious_curve	Perform a spurious curve analysis
summaryTransition	An S4 class containing summary information about a 'transition' object
summaryTransition-class	An S4 class containing summary information about a 'transition' object
test_errors	Compare numeric variables in a data frame based on root-squared differences
unshaded_equivalence_plot	Plot the outcome of a paired equivalence test
weight_status	Determine weight status from body mass index
weir_equation	Calculate energy expenditure using the Weir equation