Detecting Differentially Expressed Genes in Time Course RNA-Seq Data

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Documentation for package ‘timeSeq’ version 1.0.4

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

timeSeq_1.0.4-package	Statistical Inference for Time Course RNA-Seq Data using a Negative Binomial Mixed-Effects Model
pAbp	Example Data in Vignette
simulate.dt	Example Data in Vignette
timeSeq	Statistical Inference for Time Course RNA-Seq Data using a Negative Binomial Mixed-Effects Model
timeSeq.heatmap	Heatmap of the Most Significant NDPE Genes
timeSeq.screeplot	Scree Plot of Kullback Leibler Distance Ratios
timeSeq.sort	Sort NDPE Genes by Kullback Leibler Distance Ratios or P-values
timeSeq_1.0.4	Statistical Inference for Time Course RNA-Seq Data using a Negative Binomial Mixed-Effects Model