Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data

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Documentation for package ‘BaSTA’ version 1.9.5

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

BaSTA-package	BaSTA: a package for parametric Bayesian estimation of age-specific survival for truncated and censored capture-recapture/recovery records.
BaSTA	BaSTA: a package for parametric Bayesian estimation of age-specific survival for truncated and censored capture-recapture/recovery records.
basta	Parametric Bayesian estimation of age-specific survival for left-truncated and right-censored capture-recapture/recovery data.
basta.default	Parametric Bayesian estimation of age-specific survival for left-truncated and right-censored capture-recapture/recovery data.
CensusToCaptHist	Constructs capture-history matrix from census matrix to be used in Bayesian Survival Trajectory Analysis (BaSTA).
DataCheck	A function to check the input data file for a Bayesian Survival Trajectory Analysis (BaSTA) analysis.
MakeCovMat	Function to build a matrix of covariates (i.e. design matrix) for a Bayesian Survival Trajectory Analysis (BaSTA) analysis.
MakeLifeTable	A function for calculating standard cohort-based life tables from age at death data.
multibasta	Function to run multiple BaSTA models on the same dataset.
plot.basta	Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
print.basta	Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
print.multibasta	Function to run multiple BaSTA models on the same dataset.
sim1	Simulated dataset to demonstrate Bayesian Survival Trajectory Analysis (BaSTA)
sim1Out	Output from a Bayesian Survival Trajectory Analysis (BaSTA) analysis on a simulated dataset
summary.basta	Summarizing and plotting Bayesian Survival Trajectory Analysis (BaSTA) model outputs.
summary.multibasta	Function to run multiple BaSTA models on the same dataset.