Package: Canek
Type: Package
Title: Batch Correction of Single Cell Transcriptome Data
Version: 0.2.1
Authors@R: c(
    person("Martin", "Loza", email = "martin.loza.lopez@gmail.com", role = c("aut", "cre"), 
        comment = c(ORCID = "0000-0002-3342-2643")),
    person("Diego", "Diez", email = "diego10ruiz@gmail.com", role = c("aut"),
        comment = c(ORCID = "0000-0002-2325-4893"))
    )
Description: Non-linear/linear hybrid method for batch-effect correction
    that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between 
    datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <doi:10.1093/nargab/lqac022>.
Depends: R (>= 2.10)
Imports: FNN, irlba, numbers, fpc, bluster, igraph, matrixStats
Suggests: testthat (>= 2.1.0), Seurat, SingleCellExperiment,
        SummarizedExperiment, knitr, rmarkdown
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2022-04-18 07:52:49 UTC; martin
Author: Martin Loza [aut, cre] (<https://orcid.org/0000-0002-3342-2643>),
  Diego Diez [aut] (<https://orcid.org/0000-0002-2325-4893>)
Maintainer: Martin Loza <martin.loza.lopez@gmail.com>
Repository: CRAN
Date/Publication: 2022-05-10 10:50:02 UTC
Built: R 4.2.0; ; 2022-05-11 12:33:08 UTC; unix
