# Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis

## Documentation for package ‘dtwSat’ version 0.2.8

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

A B C D E G I L M N P R S T W misc

## -- A --

as.data.frame-method | class "twdtwTimeSeries"
as.list-method | class "twdtwMatches"
as.list-method | class "twdtwTimeSeries"
as.twdtwTimeSeries | class "twdtwTimeSeries"
as.twdtwTimeSeries-method | class "twdtwTimeSeries"

## -- B --

bands | class "twdtwRaster"
bands-method | class "twdtwRaster"

## -- C --

coordinates-method | class "twdtwRaster"
coverages | class "twdtwRaster"
coverages-method | class "twdtwRaster"
createPatterns | Create patterns
createPatterns-method | Create patterns
createPatterns-twdtwMatches | Create patterns
crop-method | class "twdtwRaster"

## -- D --

dim-method | class "twdtwRaster"
dim-method | class "twdtwTimeSeries"
dtwSat | Time-Weighted Dynamic Time Warping for Satellite Image Time Series

## -- E --

extent-method | class "twdtwRaster"

## -- G --

get | Get elements from twdtwMatches objects
getAlignments | Get elements from twdtwMatches objects
getAlignments-method | Get elements from twdtwMatches objects
getDatesFromDOY | Get dates from year and day of the year
getInternals | Get elements from twdtwMatches objects
getInternals-method | Get elements from twdtwMatches objects
getMatches | Get elements from twdtwMatches objects
getMatches-method | Get elements from twdtwMatches objects
getPatterns | Get time series from twdtw* objects
getPatterns-method | Get time series from twdtw* objects
getPatterns-twdtwMatches | Get time series from twdtw* objects
getTimeSeries | Get time series from twdtw* objects
getTimeSeries-method | Get time series from twdtw* objects
getTimeSeries-twdtwMatches | Get time series from twdtw* objects
getTimeSeries-twdtwRaster | Get time series from twdtw* objects
getTimeSeries-twdtwTimeSeries | Get time series from twdtw* objects

## -- I --

index-method | class "twdtwMatches"
index-method | class "twdtwRaster"
index-method | class "twdtwTimeSeries"
is.twdtwMatches | class "twdtwMatches"
is.twdtwMatches-method | class "twdtwMatches"
is.twdtwRaster | class "twdtwRaster"
is.twdtwRaster-method | class "twdtwRaster"
is.twdtwTimeSeries | class "twdtwTimeSeries"
is.twdtwTimeSeries-method | class "twdtwTimeSeries"

## -- L --

labels-method | class "twdtwMatches"
labels-method | class "twdtwRaster"
labels-method | class "twdtwTimeSeries"
layers | class "twdtwRaster"
layers-method | class "twdtwRaster"
length-method | class "twdtwMatches"
length-method | class "twdtwRaster"
length-method | class "twdtwTimeSeries"
levels-method | class "twdtwRaster"
levels-method | class "twdtwTimeSeries"
linearWeight | Linear weight function
logisticWeight | Logistic weight function

## -- M --

MOD13Q1.MT.yearly.patterns | Data: Pattern time series
MOD13Q1.patterns.list | Data: patterns time series
MOD13Q1.ts | Data: An example of satellite time series
MOD13Q1.ts.labels | Data: Labels of the satellite time series in MOD13Q1.ts
MOD13Q1.ts.list | Data: A list of satellite time series

## -- N --

names-method | class "twdtwRaster"
ncol-method | class "twdtwRaster"
ncol-method | class "twdtwTimeSeries"
nlayers-method | class "twdtwRaster"
nrow-method | class "twdtwRaster"
nrow-method | class "twdtwTimeSeries"

## -- P --

plot | Plotting twdtw* objects
plot-method | Plotting twdtw* objects
plot-twdtwAssessment | Plotting twdtw* objects
plot-twdtwMatches | Plotting twdtw* objects
plot-twdtwRaster | Plotting twdtw* objects
plot-twdtwTimeSeries | Plotting twdtw* objects
plotAccuracy | Plotting accuracy assessment
plotAdjustedArea | Plotting area and uncertainty
plotAlignments | Plotting alignments
plotArea | Plotting accumulated area
plotChanges | Plotting changes
plotClassification | Plotting subintervals classification
plotCostMatrix | Plotting paths
plotDistance | Plotting distance maps
plotMaps | Plotting maps
plotMapSamples | Plotting maps
plotMatches | Plotting matching points
plotPaths | Plotting paths
plotPatterns | Plotting temporal patterns
plotTimeSeries | Plotting time series
projecttwdtwRaster | class "twdtwRaster"
projecttwdtwRaster-method | class "twdtwRaster"

## -- R --

res-method | class "twdtwRaster"
resampleTimeSeries | Resample time series
resampleTimeSeries-method | Resample time series
resampleTimeSeries-twdtwMatches | Resample time series

## -- S --

shiftDates | Shift dates
shiftDates-list | Shift dates
shiftDates-method | Shift dates
shiftDates-twdtwTimeSeries | Shift dates
shiftDates-zoo | Shift dates
show-method | class "twdtwAssessment"
show-method | class "twdtwCrossValidation"
show-method | class "twdtwMatches"
show-method | class "twdtwRaster"
show-method | class "twdtwTimeSeries"
subset | Subset time series
subset-method | Subset time series
subset-twdtwMatches | Subset time series
subset-twdtwRaster | Subset time series
subset-twdtwTimeSeries | Subset time series
summary-method | class "twdtwCrossValidation"

## -- T --

twdtwApply | Apply TWDTW analysis
twdtwApply-method | Apply TWDTW analysis
twdtwApply-twdtwRaster | Apply TWDTW analysis
twdtwApply-twdtwTimeSeries | Apply TWDTW analysis
twdtwAssess | Assess TWDTW classification
twdtwAssess-data.frame | Assess TWDTW classification
twdtwAssess-matrix | Assess TWDTW classification
twdtwAssess-method | Assess TWDTW classification
twdtwAssess-table | Assess TWDTW classification
twdtwAssess-twdtwMatches | Assess TWDTW classification
twdtwAssess-twdtwRaster | Assess TWDTW classification
twdtwAssessment | class "twdtwAssessment"
twdtwAssessment-class | class "twdtwAssessment"
twdtwClassify | Classify time series
twdtwClassify-data.frame | Classify time series
twdtwClassify-list | Classify time series
twdtwClassify-method | Classify time series
twdtwClassify-twdtwRaster | Classify time series
twdtwClassify-twdtwTimeSeries | Classify time series
twdtwCrossValidate | Cross Validate temporal patterns
twdtwCrossValidate-method | Cross Validate temporal patterns
twdtwCrossValidate-twdtwTimeSeries | Cross Validate temporal patterns
twdtwCrossValidation | class "twdtwCrossValidation"
twdtwCrossValidation-class | class "twdtwCrossValidation"
twdtwMatches | class "twdtwMatches"
twdtwMatches-class | class "twdtwMatches"
twdtwMatches-create | class "twdtwMatches"
twdtwMatches-method | class "twdtwMatches"
twdtwRaster | class "twdtwRaster"
twdtwRaster-class | class "twdtwRaster"
twdtwRaster-create | class "twdtwRaster"
twdtwRaster-method | class "twdtwRaster"
twdtwReduceTime | Faster version of TWDTW apply
twdtwTimeSeries | class "twdtwTimeSeries"
twdtwTimeSeries-class | class "twdtwTimeSeries"
twdtwTimeSeries-create | class "twdtwTimeSeries"
twdtwTimeSeries-method | class "twdtwTimeSeries"
twdtwXtable | LaTeX table from accuracy metrics
twdtwXtable-method | LaTeX table from accuracy metrics
twdtwXtable-twdtwAssessment | LaTeX table from accuracy metrics
twdtwXtable-twdtwCrossValidation | LaTeX table from accuracy metrics

## -- W --

writeRaster-method | class "twdtwRaster"

## -- misc --

[-method | class "twdtwMatches"
[-method | class "twdtwRaster"
[-method | class "twdtwTimeSeries"
[[-method | class "twdtwMatches"
[[-method | class "twdtwRaster"
[[-method | class "twdtwTimeSeries"