Last updated on 2023-01-25 04:51:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.3 | 4.21 | 53.04 | 57.25 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.3 | 4.06 | 39.06 | 43.12 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.3 | 72.94 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.3 | 68.81 | OK | |||
| r-devel-windows-x86_64 | 0.3.3 | 29.00 | 85.00 | 114.00 | OK | |
| r-patched-linux-x86_64 | 0.3.3 | 4.60 | 52.46 | 57.06 | OK | |
| r-release-linux-x86_64 | 0.3.3 | 4.92 | 52.97 | 57.89 | OK | |
| r-release-macos-arm64 | 0.3.3 | 48.00 | OK | |||
| r-release-macos-x86_64 | 0.3.3 | 80.00 | OK | |||
| r-release-windows-x86_64 | 0.3.3 | 17.00 | 91.00 | 108.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.3 | 55.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.3.3 | 69.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 0.3.3 | 11.00 | 76.00 | 87.00 | ERROR |
Version: 0.3.3
Check: tests
Result: ERROR
Running 'testthat.R' [4s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(IDConverter)
>
> test_check("IDConverter")
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
trying URL 'https://zenodo.org/record/6342397/files/icgc.rda'
trying URL 'https://zenodo.org/record/6342397/files/tcga.rda'
trying URL 'https://zenodo.org/record/6342397/files/pcawg_full.rda'
[ FAIL 4 | WARN 32 | SKIP 0 | PASS 4 ]
== Failed tests ================================================================
-- Failure ('test-roxytest-testexamples-convert_icgc.R:13'): Function convert_icgc() @ L25 --
`convert_pcawg("SA170678")` did not throw an error.
-- Failure ('test-roxytest-testexamples-convert_pcawg.R:19'): Function convert_pcawg() @ L38 --
`convert_pcawg("SA5213")` did not throw an error.
-- Failure ('test-roxytest-testexamples-convert_pcawg.R:21'): Function convert_pcawg() @ L38 --
`convert_icgc("SP1677", from = "icgc_specimen_id", to = "xx")` did not throw an error.
-- Failure ('test-roxytest-testexamples-convert_tcga.R:13'): Function convert_tcga() @ L24 --
`convert_pcawg("TCGA-02-0001-10A-01W-0188-10")` did not throw an error.
[ FAIL 4 | WARN 32 | SKIP 0 | PASS 4 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64