LDAandLDAS: Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS)

Computation of linkage disequilibrium of ancestry (LDA) and linkage disequilibrium of ancestry score (LDAS). LDA calculates the pairwise linkage disequilibrium of ancestry between single nucleotide polymorphisms (SNPs). LDAS calculates the LDA score of SNPs. The methods are described in Barrie W, Yang Y, Attfield K E, et al (2022) <doi:10.1101/2022.09.23.509097>.

Version: 1.0.2
Depends: R (≥ 3.5.0)
Imports: Rcpp (≥ 1.0.8)
LinkingTo: Rcpp
Published: 2022-10-14
Author: Yaoling Yang ORCID iD [aut, cre], Daniel Lawson ORCID iD [aut]
Maintainer: Yaoling Yang <yaoling.yang at bristol.ac.uk>
License: GPL-3
NeedsCompilation: yes
Materials: README
CRAN checks: LDAandLDAS results

Documentation:

Reference manual: LDAandLDAS.pdf

Downloads:

Package source: LDAandLDAS_1.0.2.tar.gz
Windows binaries: r-devel: LDAandLDAS_1.0.2.zip, r-release: LDAandLDAS_1.0.2.zip, r-oldrel: LDAandLDAS_1.0.2.zip
macOS binaries: r-release (arm64): LDAandLDAS_1.0.2.tgz, r-oldrel (arm64): LDAandLDAS_1.0.2.tgz, r-release (x86_64): LDAandLDAS_1.0.2.tgz, r-oldrel (x86_64): LDAandLDAS_1.0.2.tgz

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