SCORPION: Single Cell Oriented Reconstruction of PANDA Individual Optimized Networks

Constructs gene regulatory networks from single-cell gene expression data using the PANDA (Passing Attributes between Networks for Data Assimilation) algorithm.

Version: 1.0.1
Imports: cli, methods, irlba, igraph, RANN, Matrix, pbapply, RhpcBLASctl
Published: 2022-09-22
Author: Daniel Osorio ORCID iD [aut, cre], Marieke L. Kuijjer ORCID iD [aut]
Maintainer: Daniel Osorio <daniecos at uio.no>
License: GPL-3
NeedsCompilation: no
CRAN checks: SCORPION results

Documentation:

Reference manual: SCORPION.pdf

Downloads:

Package source: SCORPION_1.0.1.tar.gz
Windows binaries: r-devel: SCORPION_1.0.1.zip, r-release: SCORPION_1.0.1.zip, r-oldrel: SCORPION_1.0.1.zip
macOS binaries: r-release (arm64): SCORPION_1.0.1.tgz, r-oldrel (arm64): SCORPION_1.0.1.tgz, r-release (x86_64): SCORPION_1.0.1.tgz, r-oldrel (x86_64): SCORPION_1.0.1.tgz
Old sources: SCORPION archive

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