Validation warnings now match column names correctly when
field_types are specified in a different order to the
supplied data frame columns
Passing in a data frame containing integer columns no longer causes an aggregation error (#9)
Calling functions with package prefix no longer causes an error (#10)
Fixed (some) errors about duplicate chunk labels when running
package from within rmarkdown/quarto (rmd/qmd) files (bug introduced in
previous release 1.0.2). This now allows chunks in the parent file to be
unlabelled but unfortunately still errors when there is a chunk labelled
setup. (#7)
tempdir() instead of to the directory of the
report_htmldoc.Rmd file (the default behaviour of
rmarkdown::render()). This fixes errors caused when the
library location is read-only.First release to CRAN
aes_string() in
ggplot2This release incorporates changes requested for acceptance into https://ropensci.org/. There are many breaking changes as objects have been renamed for better consistency and style.
daiquiri_report() replaces
create_report() and some parameters have been
renamed.
field_types() replaces
fieldtypes().
prepare_data(), aggregate_data(), and
report_data() parameters have been renamed.
initialise_log() replaces
log_initialise().
close_log() replaces
log_close().
template_field_types() replaces
fieldtypes_template()
Fixed error when user passes in a data.table (to
daiquiri_report() or prepare_data()) that
contains non-character columns.
daiquiri_report (formerly
create_report()) and report_data() accept a
new parameter report_title.
report_data() now accepts ... parameter
to be passed through to rmarkdown::render().
close_log() now returns the path to the closed log
file (if any).
example_prescriptions.csv replaces
example_dataset.csv as the example dataset supplied with
the package.
This release moves the reading of csv files out into a separate function in order to make it more configurable and to handle the parsing of all fields as character data for the user.
create_report() now only accepts a dataframe as the
first parameter. The textfile_contains_columnnames
parameter has been removed.
load_data() has been replaced with
read_data() and prepare_data().
log_initialise() function: dirpath
parameter renamed to log_directory.
New function read_data() reads data from a delimited
file, with all columns read in as character type.
New function prepare_data() validates a dataframe
against a fieldtypes specification, and prepares it for
aggregation.
create_report() accepts a new parameter
dataset_shortdesc for the user to specify a dataset
description to appear on the report.
export_aggregated_data() function accepts new
save_fileprefix parameter.
New function fieldtypes_template() generates
template code for creating a fieldtypes specification based on an
existing dataframe, and outputs it to the console.
Fixed ALL_FIELDS_COMBINED calculated field rowsumming NAs incorrectly.
Fixed plots failing when all values are missing.
Fixed log_message() trying to write to different log
file when called from Rmd folder (and relative path used).
Made ‘[DUPLICATES]’ and ‘[ALL_FIELDS_COMBINED]’ reserved names for data fields.
Allow column names in supplied dataframe to contain special characters.
Reduced real estate at top of report.
Removed datatype column and fixed validation warnings total from Source data tab in report.
Updated example data.
Added further validation checks for user-supplied params.
Added CITATION file.
Beta release. Complete list of functions exported:
aggregate_data()create_report() accepts either a dataframe or csv
filename as the first parameter. This may change in future.export_aggregated_data()field_types()ft_categorical()ft_datetime()ft_freetext()ft_ignore()ft_numeric()ft_simple()ft_timepoint()ft_uniqueidentifier()load_data() accepts either a dataframe or csv filename
as the first parameter. This may change in future.log_close()log_initialise()report_data()