BisRNA: Analysis of RNA Cytosine-5 Methylation

Bisulfite-treated RNA non-conversion in a set of samples is analysed as follows : each sample's non-conversion distribution is identified to a Poisson distribution. P-values adjusted for multiple testing are calculated in each sample. Combined non-conversion P-values and standard errors are calculated on the intersection of the set of samples. For further details, see C Legrand, F Tuorto, M Hartmann, R Liebers, D Jakob, M Helm and F Lyko (2017) <doi:10.1101/gr.210666.116>.

Version:	0.2.2
Depends:	R (≥ 3.3.2)
Imports:	MASS, graphics, stats, utils
Suggests:	IHW, testthat
Published:	2017-12-15
Author:	C Legrand
Maintainer:	Carine Legrand <c.legrand at dkfz.de>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation:	no
Citation:	BisRNA citation info
CRAN checks:	BisRNA results

Documentation:

Reference manual:

BisRNA.pdf

Downloads:

Package source:	BisRNA_0.2.2.tar.gz
Windows binaries:	r-devel: BisRNA_0.2.2.zip, r-release: BisRNA_0.2.2.zip, r-oldrel: BisRNA_0.2.2.zip
macOS binaries:	r-release (arm64): BisRNA_0.2.2.tgz, r-oldrel (arm64): BisRNA_0.2.2.tgz, r-release (x86_64): BisRNA_0.2.2.tgz, r-oldrel (x86_64): BisRNA_0.2.2.tgz
Old sources:	BisRNA archive

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