FIT: Transcriptomic Dynamics Models in Field Conditions
Provides functionality for constructing
statistical models of transcriptomic dynamics in field conditions.
It further offers the function to predict expression of a gene given
the attributes of samples and meteorological data. Nagano, A. J., Sato,
Y., Mihara, M., Antonio, B. A., Motoyama, R., Itoh, H., Naganuma, Y., and
Izawa, T. (2012). <doi:10.1016/j.cell.2012.10.048>. Iwayama, K., Aisaka, Y.,
Kutsuna, N., and Nagano, A. J. (2017). <doi:10.1093/bioinformatics/btx049>.
| Version: |
0.0.6 |
| Depends: |
R (≥ 3.2.2) |
| Imports: |
methods, Rcpp (≥ 0.11.2), XML, gglasso (≥ 1.4), MASS |
| LinkingTo: |
Rcpp, RcppEigen (≥ 0.3.2.1.2) |
| Suggests: |
knitr, rmarkdown |
| Published: |
2019-01-07 |
| Author: |
Koji Iwayama [cre],
Yuri Aisaka [aut] |
| Maintainer: |
Koji Iwayama <fieldtranscriptome at gmail.com> |
| License: |
MPL (≥ 2) | file LICENSE |
| NeedsCompilation: |
yes |
| SystemRequirements: |
C++11 |
| CRAN checks: |
FIT results |
Documentation:
Downloads:
Linking:
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