ML.MSBD: Maximum Likelihood Inference on Multi-State Trees

Inference of a multi-states birth-death model from a phylogeny, comprising a number of states N, birth and death rates for each state and on which edges each state appears. Inference is done using a hybrid approach: states are progressively added in a greedy approach. For a fixed number of states N the best model is selected via maximum likelihood. Reference: J. Barido-Sottani, T. G. Vaughan and T. Stadler (2018) <doi:10.1098/rsif.2018.0512>.

Version:	1.2.1
Imports:	ape (≥ 5.1), foreach
Suggests:	knitr, rmarkdown, doParallel
Published:	2021-04-16
Author:	Joelle Barido-Sottani [aut, cre]
Maintainer:	Joelle Barido-Sottani <joelle.barido-sottani at m4x.org>
License:	GPL-3
NeedsCompilation:	no
Materials:	NEWS
CRAN checks:	ML.MSBD results

Documentation:

Reference manual:	ML.MSBD.pdf
Vignettes:	Using ML.MSBD

Downloads:

Package source:	ML.MSBD_1.2.1.tar.gz
Windows binaries:	r-devel: ML.MSBD_1.2.1.zip, r-release: ML.MSBD_1.2.1.zip, r-oldrel: ML.MSBD_1.2.1.zip
macOS binaries:	r-release (arm64): ML.MSBD_1.2.1.tgz, r-oldrel (arm64): ML.MSBD_1.2.1.tgz, r-release (x86_64): ML.MSBD_1.2.1.tgz, r-oldrel (x86_64): ML.MSBD_1.2.1.tgz
Old sources:	ML.MSBD archive

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