RScelestial: Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference

Scelestial infers a lineage tree from single-cell DNA mutation matrix. It generates a tree with approximately maximum parsimony through a Steiner tree approximation algorithm.

Version:	1.0.3
Imports:	Rcpp (≥ 1.0.1)
LinkingTo:	Rcpp
Suggests:	igraph, knitr, rmarkdown, stringr, seqinr
Published:	2021-12-09
Author:	Mohammad Hadi Foroughmand Araabi [aut, cre], Sama Goliaei [aut, ctb], Alice McHardy [ctb]
Maintainer:	Mohammad Hadi Foroughmand Araabi <foroughmand at gmail.com>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation:	yes
SystemRequirements:	C++11
Materials:	NEWS
CRAN checks:	RScelestial results

Documentation:

Reference manual:	RScelestial.pdf
Vignettes:	RScelestial Vignette

Downloads:

Package source:	RScelestial_1.0.3.tar.gz
Windows binaries:	r-devel: RScelestial_1.0.3.zip, r-release: RScelestial_1.0.3.zip, r-oldrel: RScelestial_1.0.3.zip
macOS binaries:	r-release (arm64): RScelestial_1.0.3.tgz, r-oldrel (arm64): RScelestial_1.0.3.tgz, r-release (x86_64): RScelestial_1.0.3.tgz, r-oldrel (x86_64): RScelestial_1.0.3.tgz
Old sources:	RScelestial archive

Linking:

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