aroma.core: Core Methods and Classes Used by ’aroma.*’ Packages Part of the Aroma Framework

Installation

This R package is available on CRAN and can be installed in R as:

# install.packages("BiocManager")
BiocManager::install(c("aroma.light", "DNAcopy"))

install.packages("aroma.core")

To install the optional dependency sfit, use:

install.packages("sfit", repos = "https://henrikbengtsson.r-universe.dev")

This will install the package from source. Similarly, to install the rarely needed optional dependencies expectile, HaarSeg, and mpcbs, use:

install.packages("expectile", repos = "https://henrikbengtsson.r-universe.dev")
install.packages("HaarSeg", repos = "https://henrikbengtsson.r-universe.dev")
install.packages("mpcbs", repos = c("https://r-forge.r-project.org", getOption("repos")))

Pre-release version

To install the pre-release version that is available in Git branch develop on GitHub, use:

remotes::install_github("HenrikBengtsson/aroma.core", ref = "develop")

This will install the package from source.