roots: Reconstructing Ordered Ontogenic Trajectories

A set of tools to reconstruct ordered ontogenic trajectories from single cell RNAseq data.

Version:	1.0
Depends:	R (≥ 3.0)
Imports:	animation (≥ 2.4), rARPACK (≥ 0.11-0), igraph (≥ 1.0.0)
Suggests:	knitr, rmarkdown
Published:	2017-07-11
Author:	Wajid Jawaid [aut, cre]
Maintainer:	Wajid Jawaid <wj241 at cam.ac.uk>
License:	GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation:	no
Materials:	README
CRAN checks:	roots results

Documentation:

Reference manual:	roots.pdf
Vignettes:	Infer biologically plausible journeys through single cell data

Downloads:

Package source:	roots_1.0.tar.gz
Windows binaries:	r-devel: roots_1.0.zip, r-release: roots_1.0.zip, r-oldrel: roots_1.0.zip
macOS binaries:	r-release (arm64): roots_1.0.tgz, r-oldrel (arm64): roots_1.0.tgz, r-release (x86_64): roots_1.0.tgz, r-oldrel (x86_64): roots_1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=roots to link to this page.