A fast, user-friendly tool for annotating potential deleterious variants in the untranslated regions for both human and mouse species. Y Liu, JD Dougherty (2021) <doi:10.1101/2021.06.23.449510>.
| Version: |
1.0.4 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
parallel, doParallel, data.table, readr, stringr, biomaRt, vcfR, Biostrings, dplyr, tidyr, keras, AnnotationHub, ensembldb, AnnotationFilter, BiocGenerics, GenomicFeatures, GenomicRanges, IRanges, foreach, rtracklayer, stats, utils, xml2 |
| Suggests: |
testthat, knitr, rmarkdown, ggplot2 |
| Published: |
2021-08-23 |
| Author: |
Yating Liu  [aut,
cre],
Joseph D. Dougherty
[aut] |
| Maintainer: |
Yating Liu <yatinghust at gmail.com> |
| License: |
GPL (≥ 3) |
| NeedsCompilation: |
no |
| SystemRequirements: |
Linux or MacOS Intel chip tensorflow (1.14.0) |
| Materials: |
README NEWS |
| CRAN checks: |
utr.annotation results |