IDSL.CSA: Composite Spectra Analysis (CSA) for High-Resolution Mass Spectrometry Analyses

A fragmentation spectra detection pipeline for high-throughput LC/HRMS data processing using peaklists generated by the 'IDSL.IPA' package. The 'IDSL.CSA' package can deconvolute fragmentation spectra from Composite Spectra Analysis (CSA), Data Dependent Acquisition (DDA) analysis, and various Data-Independent Acquisition (DIA) methods such as MS^E, All-Ion Fragmentation (AIF) and SWATH analysis.

Version:	1.0
Depends:	R (≥ 4.0)
Imports:	IDSL.MXP (≥ 1.8), IDSL.IPA (≥ 2.6), IDSL.FSA, doParallel, foreach, readxl
Published:	2023-01-23
Author:	Sadjad Fakouri-Baygi [cre, aut], Dinesh Barupal [aut]
Maintainer:	Sadjad Fakouri-Baygi <sadjad.fakouri-baygi at mssm.edu>
BugReports:	https://github.com/idslme/idsl.csa/issues
License:	MIT + file LICENSE
URL:	https://github.com/idslme/idsl.csa
NeedsCompilation:	no
CRAN checks:	IDSL.CSA results

Documentation:

Reference manual:

IDSL.CSA.pdf

Downloads:

Package source:	IDSL.CSA_1.0.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: IDSL.CSA_1.0.zip
macOS binaries:	r-release (arm64): IDSL.CSA_1.0.tgz, r-oldrel (arm64): IDSL.CSA_1.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

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